CDS

Accession Number TCMCG057C27252
gbkey CDS
Protein Id XP_018486146.1
Location complement(join(32600744..32601292,32601381..32601446,32601532..32601641,32602085..32602150,32602359..32602471,32602747..32602832,32602915..32603059,32603148..32603242))
Gene LOC108856763
GeneID 108856763
Organism Raphanus sativus

Protein

Length 409aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018630644.1
Definition PREDICTED: embryonic stem cell-specific 5-hydroxymethylcytosine-binding protein [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category T
Description Suppressor of mec-8 and unc-52 protein homolog
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03041        [VIEW IN KEGG]
KEGG_ko ko:K13109        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0000075        [VIEW IN EMBL-EBI]
GO:0000278        [VIEW IN EMBL-EBI]
GO:0000375        [VIEW IN EMBL-EBI]
GO:0000377        [VIEW IN EMBL-EBI]
GO:0000398        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005681        [VIEW IN EMBL-EBI]
GO:0005684        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006397        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0007049        [VIEW IN EMBL-EBI]
GO:0007088        [VIEW IN EMBL-EBI]
GO:0007093        [VIEW IN EMBL-EBI]
GO:0007094        [VIEW IN EMBL-EBI]
GO:0007346        [VIEW IN EMBL-EBI]
GO:0008104        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008380        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0010564        [VIEW IN EMBL-EBI]
GO:0010639        [VIEW IN EMBL-EBI]
GO:0010948        [VIEW IN EMBL-EBI]
GO:0010965        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016071        [VIEW IN EMBL-EBI]
GO:0022402        [VIEW IN EMBL-EBI]
GO:0030071        [VIEW IN EMBL-EBI]
GO:0031577        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0033036        [VIEW IN EMBL-EBI]
GO:0033043        [VIEW IN EMBL-EBI]
GO:0033044        [VIEW IN EMBL-EBI]
GO:0033045        [VIEW IN EMBL-EBI]
GO:0033046        [VIEW IN EMBL-EBI]
GO:0033047        [VIEW IN EMBL-EBI]
GO:0033048        [VIEW IN EMBL-EBI]
GO:0033365        [VIEW IN EMBL-EBI]
GO:0034501        [VIEW IN EMBL-EBI]
GO:0034502        [VIEW IN EMBL-EBI]
GO:0034613        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045786        [VIEW IN EMBL-EBI]
GO:0045839        [VIEW IN EMBL-EBI]
GO:0045841        [VIEW IN EMBL-EBI]
GO:0045930        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048523        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0051128        [VIEW IN EMBL-EBI]
GO:0051129        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051641        [VIEW IN EMBL-EBI]
GO:0051726        [VIEW IN EMBL-EBI]
GO:0051783        [VIEW IN EMBL-EBI]
GO:0051784        [VIEW IN EMBL-EBI]
GO:0051983        [VIEW IN EMBL-EBI]
GO:0051985        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070727        [VIEW IN EMBL-EBI]
GO:0071005        [VIEW IN EMBL-EBI]
GO:0071011        [VIEW IN EMBL-EBI]
GO:0071173        [VIEW IN EMBL-EBI]
GO:0071174        [VIEW IN EMBL-EBI]
GO:0071459        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901987        [VIEW IN EMBL-EBI]
GO:1901988        [VIEW IN EMBL-EBI]
GO:1901990        [VIEW IN EMBL-EBI]
GO:1901991        [VIEW IN EMBL-EBI]
GO:1902099        [VIEW IN EMBL-EBI]
GO:1902100        [VIEW IN EMBL-EBI]
GO:1903047        [VIEW IN EMBL-EBI]
GO:1905818        [VIEW IN EMBL-EBI]
GO:1905819        [VIEW IN EMBL-EBI]
GO:1990904        [VIEW IN EMBL-EBI]
GO:2000816        [VIEW IN EMBL-EBI]
GO:2001251        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTGCGGCAGGGCTCGCTGTACTCTGAGACCAGAAGATGTCCGCAGGGCTTGTCACCGCCATGGCTTTCCTGCCTCTTTTCTTCATCTCGAATGTTACCGTCCTTCTTACAACGTTGCGCCGGGATCTTATATGCCGGTTCTACGGAGAGACAATGATGGTGTTGCTGTTCACTGTATGAAGTGGGGATTAGTCCCTGGTTTCACTAAGAAAACTGATAAGCCTGATTTCTTCAAAATGTTTAATGCTCGGTCTGAATCGGTTGCTGAGAAAGCATCTTTTCGTCGATTGCTTCCAAAGAATAGGTGCCTTGTTGCAGTTGATGGGTTCTATGAGTGGAAAAAGGAAGGCTCAAAAAAGCAACCCTACTACATCCATTTTAAGGATGAGAGGCCTTTGGTCTTTGCTGCTCTTTTTGATTCTTGGCAGAACTCAGGAGGTGAGACACTTTATACCTTCACCATTTTGACAACCGCTTCCTCGTCAGCCTTGGATTGGCTCCATGACAGAATGCCAGTAATTTTGGGTGACAAGGATTCAGTTGATACATGGTTAGATGATCCCTCAACGTCGAAACTGCAGCCATTACTTGCACCATATGAGAAATCGGATTTGGTATGGTATCCAGTAACCTCTGCAATTGGTAAACTATCTTTTGATGGACCAGAGTGTATTCAACAGATACCGTTAAAGGCCTCGCAGAACAGCTTGATCTCCAAATTTTTCTCAGCAAAGCAGCCAAAAACAGAAGAAAAAGACAAGGAAACCAGATCCACTGATGCAACCATCCTAGCTGGTCCGAAAGAGGAACCTTTACTTGAAGGTTATGAAGGGGTCGTAGTCTCGGATAGCAATGATGAGAGTAAACAAGTGGAAGAGGAGAATGAAGCCCAAAAGATTGTGAAAGCGGAAGGAGATAGGTCAGCAGGCATTACATCTGATCGTGAATCTGTAAAGAAGGAAATTGAGGAGGGAGAAGGTGAATCCGTAGAGACTGGTGGCGGCTTAGAATTTACCGGGGGGGAGTCTTCAGTAAAGAGTGGGACAAAGAGAGGTTATGAGTTATTTTCAGGTCAAGAAAATCCATGGAAACAGTCTGTTGTGAGGAGGCTACAAGATGTTGATAAAAGCTCTGGGAAGAAGCAAGGAAAAGGAAAGTCTAACACCAAGAAATCTAAAGAGAAGGAGACGCAGCAGTCTACATTACATTTCTTTTTCGATGAGAAATAG
Protein:  
MCGRARCTLRPEDVRRACHRHGFPASFLHLECYRPSYNVAPGSYMPVLRRDNDGVAVHCMKWGLVPGFTKKTDKPDFFKMFNARSESVAEKASFRRLLPKNRCLVAVDGFYEWKKEGSKKQPYYIHFKDERPLVFAALFDSWQNSGGETLYTFTILTTASSSALDWLHDRMPVILGDKDSVDTWLDDPSTSKLQPLLAPYEKSDLVWYPVTSAIGKLSFDGPECIQQIPLKASQNSLISKFFSAKQPKTEEKDKETRSTDATILAGPKEEPLLEGYEGVVVSDSNDESKQVEEENEAQKIVKAEGDRSAGITSDRESVKKEIEEGEGESVETGGGLEFTGGESSVKSGTKRGYELFSGQENPWKQSVVRRLQDVDKSSGKKQGKGKSNTKKSKEKETQQSTLHFFFDEK